Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs78016847 chr21:44245083 T/A 0.000169 288 25.53 43.53 13.07 KM Plot
KIRP rs7802161 chr7:137742714 A/T 6.54E-9 289 25.93 18.27 9.77 KM Plot
KIRP rs7803574 chr7:96331358 T/C 0 286 7.67 21.67 26 KM Plot
KIRP rs78051868 chr17:80802830 C/T 8.06E-9 284 26.2 25.55 16.4 KM Plot
KIRP rs78069186 chr6:148630124 G/A 1.98E-5 283 26.38 19.63 17.13 KM Plot
KIRP rs78086674 chr10:88248288 T/C 5.8E-8 285 26.38 23.1 9.77 KM Plot
KIRP rs78144315 chr21:44254894 C/T 0.000179 285 25.5 43.53 13.07 KM Plot
KIRP rs78152176 chr18:75525887 A/G 3.44E-5 282 26 23.8 3.73 KM Plot
KIRP rs78154906 chr6:148649456 C/T 0.000103 285 26.38 17.47 18.2 KM Plot
KIRP rs78164170 chr17:80814209 C/T 5.48E-9 289 26.37 25.5 16.4 KM Plot
KIRP rs78172543 chr16:3654258 A/G 0.000126 283 26.1 22.02 19.9 KM Plot
KIRP rs78185961 chr12:2354263 A/G 0 283 26.38 19.28 4.63 KM Plot
KIRP rs78282171 chr15:61550576 G/C 1.35E-7 284 26.28 24.73 7.47 KM Plot
KIRP rs78287747 chr6:148639703 T/G 0.000105 284 26.37 17.47 18.2 KM Plot
KIRP rs78291044 chr21:44277236 G/A 0.000151 289 25.58 40.7 13.07 KM Plot